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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001869000
- symbol?: mepA
- synonym:
- description?: multidrug efflux MATE transporter MepA
- multidrug efflux MATE transporter MepA
- MATE efflux family protein
- mepA: Multidrug export protein mepA
- Multidrug export protein mepA
- MATE family multi-antimicrobial extrusion protein
- MDR efflux family protein
- Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2364066..2365421
- synteny block?: BlockID0012430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0333
08BA02176:
C248_0389
11819-97:
MS7_0324 (mepA)
6850:
RSAU_000280 (mepA)
71193:
ST398NM01_0415
ECT-R 2:
ECTR2_294
ED133:
SAOV_0359
ED98:
SAAV_0302
HO 5096 0412:
SAEMRSA15_02900
JH1:
SaurJH1_0393
JH9:
SaurJH9_0383
JKD6008:
SAA6008_00311 (mepA)
JKD6159:
SAA6159_00309 (mepA)
LGA251:
SARLGA251_02950 (mepA)
M013:
M013TW_0314
MRSA252:
SAR0331
MSHR1132:
SAMSHR1132_03080
MSSA476:
SAS0311
Mu3:
SAHV_0331
Mu50:
SAV0334
MW2:
MW0311
RF122:
SAB0284
ST398:
SAPIG0415
T0131:
SAT0131_00339
TCH60:
HMPREF0772_10161 (mepA)
TW20:
SATW20_04020 (mepA)
USA300_TCH1516:
USA300HOU_0355
VC40:
SAVC_01420
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIGFLEDSHMISAISLTLP
N315 MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIGFLEDSHMISAISLTLP
NCTC8325 MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIGFLEDSHMISAISLTLP
Newman MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIGFLEDSHMISAISLTLP
USA300_FPR3757 MKDEQLYYFEKSPVFKAMMHFSLPMMIGTLLSVIYGILNIYFIGFLEDSHMISAISLTLP
************************************************************
COL VFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYGGIALGLIVILVTLPFSDQ
N315 VFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYGGIALGLIVILVTLPFSDQ
NCTC8325 VFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYGGIALGLIVILVTLPFSDQ
Newman VFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYGGIALGLIVILVTLPFSDQ
USA300_FPR3757 VFAILMGLGNLFGVGAGTYISRLLGAKDYSKSKFVSSFSIYGGIALGLIVILVTLPFSDQ
************************************************************
COL IAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFARAIGAPMVSMIGMLASVGLNI
N315 IAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFARAIGAPMISMIGMLASVGLNI
NCTC8325 IAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFARAIGAPMVSMIGMLASVGLNI
Newman IAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFARAIGAPMVSMIGMLASVGLNI
USA300_FPR3757 IAAILGARGETLALTSNYLKVMFLSAPFVILFFILEQFARAIGAPMVSMIGMLASVGLNI
**********************************************:*************
COL ILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEI
N315 ILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEI
NCTC8325 ILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEI
Newman ILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEI
USA300_FPR3757 ILDPILIFGFDLNVVGAALGTAISNVAAALFFIIYFMKNSDVVSVNIKLAKPNKEMLSEI
************************************************************
COL FKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPL
N315 FKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPL
NCTC8325 FKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPL
Newman FKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPL
USA300_FPR3757 FKIGIPAFLMSILMGFTGLVLNLFLAHYGNFAIASYGISFRLVQFPELIIMGLCEGVVPL
************************************************************
COL IAYNFMANKGRMKDVIKAVIMSIGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFILK
N315 IAYNFMANKGRMKDVIKAVIMSIGVIFVVCMIAVFTIGHHMVGLFTTDQAIVEMATFILK
NCTC8325 IAYNFMANKGRMKDVIKAVIMSIGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFILK
Newman IAYNFMANKGRMKDVIKAVIMSIGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFILK
USA300_FPR3757 IAYNFMANKGRMKDVIKAVIMSIGVIFVVCMSAVFTIGHHMVGLFTTDQAIVEMATFILK
******************************* ****************************
COL VTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWSLL
N315 VTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWSLL
NCTC8325 VTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWSLL
Newman VTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWSLL
USA300_FPR3757 VTMASLLLNGIGFLFTGMLQATGQGRGATIMAILQGAIIIPVLFIMNALFGLTGVIWSLL
************************************************************
COL IAESLCALAAMLIVYLLRDRLTVDTSELIEG
N315 IAESLCALAAMLIVYLLRDRLTVDTSELIEG
NCTC8325 IAESLCALAAMLIVYLLRDRLTVDTSELIEG
Newman IAESLCALAAMLIVYLLRDRLTVDTSELIEG
USA300_FPR3757 IAESLCALAAMLIVYLLRDRLTVDTSELIEG
*******************************