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Summary[edit source | edit]

  • pan ID?: SAUPAN003597000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3939687..3940052
  • synteny block?: BlockID0026740
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1251
    08BA02176:
    C248_1327
    11819-97:
    MS7_1251
    71193:
    ST398NM01_1296
    ECT-R 2:
    ECTR2_1149
    ED133:
    SAOV_1295
    ED98:
    SAAV_1268
    HO 5096 0412:
    SAEMRSA15_11280
    JH1:
    SaurJH1_1379
    JH9:
    SaurJH9_1353
    JKD6008:
    SAA6008_01248
    JKD6159:
    SAA6159_01148
    LGA251:
    SARLGA251_12040
    M013:
    M013TW_1235
    MRSA252:
    SAR1269
    MSHR1132:
    SAMSHR1132_11360
    MSSA476:
    SAS1227
    Mu3:
    SAHV_1283
    Mu50:
    SAV1293
    MW2:
    MW1176
    RF122:
    SAB1155
    ST398:
    SAPIG1296
    T0131:
    SAT0131_01349
    TCH60:
    HMPREF0772_11935
    TW20:
    SATW20_12870
    USA300_TCH1516:
    USA300HOU_1225
    VC40:
    SAVC_05630

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MYNKDDVLNQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNY
    N315            MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNY
    NCTC8325        MYNKDDVLNQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNY
    Newman          MYNKDDVLNQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNY
    USA300_FPR3757  MYNKDDVLNQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNY
                    ********:***************************************************

    COL             GKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHS
    N315            GKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHS
    NCTC8325        GKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHS
    Newman          GKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHS
    USA300_FPR3757  GKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHS
                    ************************************************************

    COL             D
    N315            D
    NCTC8325        D
    Newman          D
    USA300_FPR3757  D
                    *