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NCBI: 03-AUG-2016
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus NCTC8325
- locus tag: SAOUHSC_01311
- pan locus tag?: SAUPAN003685000
- symbol: SAOUHSC_01311
- pan gene symbol?: —
- synonym:
- product: ABC transporter ATP-binding protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
- Gene ID: 3920137 NCBI
- RefSeq: YP_499841 NCBI
- BioCyc: G1I0R-1225 BioCyc
- MicrobesOnline: 1289755 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901GTGATTAAATTGATTCAAATATCTAATATCAACAAGTCATTTAATAAAAGATGTGTTCTA
AAAAATATTTCGTTCGATATTGAACAAGGTAAATGTATCGCTTTAATTGGAAAAAATGGT
GCTGGAAAGTCAACGTTAATTGATATATTAATTGGTAATGTTAATGCTAATTCTGGTGAG
ATATTTGATAAAGACAAGTTATTACAAAGTGAAAATCGCAGTATAATGTTCCAAAAAACG
ATGTTTCCAGATCAATTAAAAGTTATTGAGATTATCAACTTATATCAATCATTTTACGAA
AATCCATTACCATTGGAAGAAATAATAGAACTGACGAAATTTGATTCTAGTCAACTGAAC
CAATTTGTAAATAAACTTTCTGGTGGTCAACAACGATTACTCGATTTTGTATTATCTTTA
ATCGGACAACCACAATTGATCTTATTAGATGAACCAACATCGACTATGGATATAGAAATT
AGAGAATATTTTTGGTCAATTATTGAAAATTTAAAAGAAGATAATCGAACGATACTCTAT
ACATCGCACTATATTGAAGAAGTCGAACGTATGTCAGACAAAATTATTCTCATTGAAAAT
GGAGAAATAATACTTAATGATTCAACGTCACATATTAGAACCAATCAGCAATCTCAGATT
ACGTTATCCGATGAATATATAAGAAAGTTAAAACTAGATAAAGATGATTTAGTTATTCAA
AAAAATCATAATGGCACTATCAAAATTATTACTTCAAATGTAAATGATACGATTTTATAT
CTTCAACAACTTCATATTAATTTGGATGATATTGAAATACAAAAAGTCTCAATTGTTGAT
TCATACTTCAACAATAAAAAGCAAAGGGGATCTAATTATGATACTAAGTTACTTGAAAAT
CGAATTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAOUHSC_01311
- symbol: SAOUHSC_01311
- description: ABC transporter ATP-binding protein
- length: 302
- theoretical pI: 4.97775
- theoretical MW: 34931.8
- GRAVY: -0.309934
⊟Function[edit | edit source]
- ⊞TIGRFAM: Transport and binding proteins Other daunorubicin resistance ABC transporter, ATP-binding protein (TIGR01188; HMM-score: 140.8)Transport and binding proteins Carbohydrates, organic alcohols, and acids ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system (TIGR03864; HMM-score: 116.8)and 72 more
- TheSEED :
- ABC transporter, ATP-binding protein
- ⊞PFAM: P-loop_NTPase (CL0023) ABC_tran; ABC transporter (PF00005; HMM-score: 86.6)and 15 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIKLIQISNINKSFNKRCVLKNISFDIEQGKCIALIGKNGAGKSTLIDILIGNVNANSGEIFDKDKLLQSENRSIMFQKTMFPDQLKVIEIINLYQSFYENPLPLEEIIELTKFDSSQLNQFVNKLSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNRTILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQSQITLSDEYIRKLKLDKDDLVIQKNHNGTIKIITSNVNDTILYLQQLHINLDDIEIQKVSIVDSYFNNKKQRGSNYDTKLLENRI
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- ⊟interaction partners:
SAOUHSC_00519 (rplA) 50S ribosomal protein L1 [2] (data from MRSA252) SAOUHSC_02492 (rplO) 50S ribosomal protein L15 [2] (data from MRSA252) SAOUHSC_02484 (rplQ) 50S ribosomal protein L17 [2] (data from MRSA252) SAOUHSC_01757 (rplU) 50S ribosomal protein L21 [2] (data from MRSA252) SAOUHSC_01232 (rpsB) 30S ribosomal protein S2 [2] (data from MRSA252) SAOUHSC_02506 (rpsC) 30S ribosomal protein S3 [2] (data from MRSA252) SAOUHSC_02494 (rpsE) 30S ribosomal protein S5 [2] (data from MRSA252) SAOUHSC_01234 (tsf) elongation factor Ts [2] (data from MRSA252) SAOUHSC_00187 formate acetyltransferase [2] (data from MRSA252) SAOUHSC_00374 inosine-5'-monophosphate dehydrogenase [2] (data from MRSA252) SAOUHSC_00488 hypothetical protein [2] (data from MRSA252) SAOUHSC_00529 elongation factor G [2] (data from MRSA252) SAOUHSC_00530 elongation factor Tu [2] (data from MRSA252) SAOUHSC_00795 glyceraldehyde-3-phosphate dehydrogenase [2] (data from MRSA252) SAOUHSC_00878 hypothetical protein [2] (data from MRSA252) SAOUHSC_01040 pyruvate dehydrogenase complex, E1 component subunit alpha [2] (data from MRSA252) SAOUHSC_01043 dihydrolipoamide dehydrogenase [2] (data from MRSA252) SAOUHSC_01100 thioredoxin [2] (data from MRSA252) SAOUHSC_01337 transketolase [2] (data from MRSA252) SAOUHSC_01490 DNA-binding protein HU [2] (data from MRSA252) SAOUHSC_01806 pyruvate kinase [2] (data from MRSA252) SAOUHSC_01819 hypothetical protein [2] (data from MRSA252) SAOUHSC_01820 acetate kinase [2] (data from MRSA252) SAOUHSC_02399 glucosamine--fructose-6-phosphate aminotransferase [2] (data from MRSA252) SAOUHSC_02441 alkaline shock protein 23 [2] (data from MRSA252) SAOUHSC_02969 arginine deiminase [2] (data from MRSA252)
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: [3] ⊟Multi-gene expression profiles
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Roy R Chaudhuri, Andrew G Allen, Paul J Owen, Gil Shalom, Karl Stone, Marcus Harrison, Timothy A Burgis, Michael Lockyer, Jorge Garcia-Lara, Simon J Foster, Stephen J Pleasance, Sarah E Peters, Duncan J Maskell, Ian G Charles
Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH).
BMC Genomics: 2009, 10;291
[PubMed:19570206] [WorldCat.org] [DOI] (I e) - ↑ Jump up to: 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 2.25 Artem Cherkasov, Michael Hsing, Roya Zoraghi, Leonard J Foster, Raymond H See, Nikolay Stoynov, Jihong Jiang, Sukhbir Kaur, Tian Lian, Linda Jackson, Huansheng Gong, Rick Swayze, Emily Amandoron, Farhad Hormozdiari, Phuong Dao, Cenk Sahinalp, Osvaldo Santos-Filho, Peter Axerio-Cilies, Kendall Byler, William R McMaster, Robert C Brunham, B Brett Finlay, Neil E Reiner
Mapping the protein interaction network in methicillin-resistant Staphylococcus aureus.
J Proteome Res: 2011, 10(3);1139-50
[PubMed:21166474] [WorldCat.org] [DOI] (I p) - ↑ Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
PLoS Genet: 2016, 12(4);e1005962
[PubMed:27035918] [WorldCat.org] [DOI] (I e)