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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001819000
- symbol?: —
- synonym:
- description?: phage tail family protein
- phage tail family protein
- holin-like protein
- phiSLT ORF191-like protein
- phage protein
- phage tail protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2256614..2257998
- synteny block?: BlockID0011950
- occurrence?: in 52% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0362
11819-97:
MS7_1455
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_0332
ED98:
SAAV_2019
HO 5096 0412:
SAEMRSA15_13610
JH1:
SaurJH1_1092
JH9:
SaurJH9_1071
JKD6008:
—
JKD6159:
SAA6159_01364
LGA251:
—
M013:
—
MRSA252:
SAR1506
MSHR1132:
—
MSSA476:
SAS0945
Mu3:
—
Mu50:
—
MW2:
MW1389
RF122:
—
ST398:
SAPIG0387
T0131:
—
TCH60:
HMPREF0772_11703
TW20:
—
USA300_TCH1516:
USA300HOU_1440
VC40:
—
⊟Genome Viewer[edit | edit source]
COL | |
NCTC8325 | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
NCTC8325 MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
USA300_FPR3757 MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
************************************************************
COL LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
NCTC8325 LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
USA300_FPR3757 LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
************************************************************
COL IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
NCTC8325 IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
USA300_FPR3757 IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
************************************************************
COL PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
NCTC8325 PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
USA300_FPR3757 PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
************************************************************
COL NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
NCTC8325 NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
USA300_FPR3757 NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
**********************************