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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001819000
- symbol?: —
- synonym:
- description?: phage tail family protein
- phage tail family protein
- holin-like protein
- phiSLT ORF191-like protein
- phage protein
- phage tail protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2256614..2257998
- synteny block?: BlockID0011950
- occurrence?: in 50% of 34 strains
dit : serogroup A prophage tail distal baseplate hub-cap protein [1]
Staphylococcal prophage assemble their phage tails on a baseplate consisting of six distal baseplate hub-cap proteins. The tail tape measure protein is sequestered in the internal foramen of the hexamer and the capsid-proximal face of the baseplate nucleates major tail tube protein spiral polymerization. Additional functional proteins assemble on the baseplate hub-cap including the tail tip-associated lysins, the receptor-binding proteins and the tail fiber proteins generating a mature phage tail.
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0362
11819-97:
MS7_1455
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_0332
ED98:
SAAV_2019
HO 5096 0412:
SAEMRSA15_13610
JH1:
SaurJH1_1092
JH9:
SaurJH9_1071
JKD6008:
—
JKD6159:
SAA6159_01364
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
SAR1506
MSHR1132:
—
MSSA476:
SAS0945
Mu3:
—
Mu50:
—
MW2:
MW1389
RF122:
—
ST398:
SAPIG0387
T0131:
—
TCH60:
HMPREF0772_11703
TW20:
—
USA300_TCH1516:
USA300HOU_1440
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
NCTC8325 MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
USA300_FPR3757 MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
************************************************************
COL LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
NCTC8325 LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
USA300_FPR3757 LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
************************************************************
COL IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
NCTC8325 IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
USA300_FPR3757 IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
************************************************************
COL PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
NCTC8325 PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
USA300_FPR3757 PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
************************************************************
COL NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
NCTC8325 NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
USA300_FPR3757 NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
**********************************
- ↑ Adeline Goulet, Joséphine Lai-Kee-Him, David Veesler, Isabelle Auzat, Gautier Robin, Dale A Shepherd, Alison E Ashcroft, Eric Richard, Julie Lichière, Paulo Tavares, Christian Cambillau, Patrick Bron
The opening of the SPP1 bacteriophage tail, a prevalent mechanism in Gram-positive-infecting siphophages.
J Biol Chem: 2011, 286(28);25397-405
[PubMed:21622577] [WorldCat.org] [DOI] (I p)James L Kizziah, Keith A Manning, Altaira D Dearborn, Terje Dokland
Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage.
PLoS Pathog: 2020, 16(2);e1008314
[PubMed:32069326] [WorldCat.org] [DOI] (I e)