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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003193000
- symbol?: ltaA
- synonym:
- description?: MFS transporter
- MFS transporter
- glycolipid permease LtaA, putative
- Glycolipid permease ltaA
- major facilitator superfamily transporter
- major facilitator transporter
- membrane protein
- MFS family major facilitator transporter
- MFS-type transporter
- Permease
- putative glycolipid permease ltaA
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3585331..3586113
- synteny block?: BlockID0022800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0970
08BA02176:
C248_1040
11819-97:
MS7_0971 (ltaA)
6850:
RSAU_000901 (ltaA)
71193:
ST398NM01_1011
ECT-R 2:
ECTR2_870
ED133:
SAOV_0961c
ED98:
SAAV_0978
HO 5096 0412:
SAEMRSA15_08460
JH1:
SaurJH1_1033
JH9:
SaurJH9_1014
JKD6008:
SAA6008_00971
JKD6159:
SAA6159_00872
LGA251:
SARLGA251_09310
M013:
M013TW_0940
MRSA252:
SAR0986
MSHR1132:
SAMSHR1132_08630
MSSA476:
SAS0885
Mu3:
SAHV_1010
Mu50:
SAV1016
MW2:
MW0897
RF122:
SAB0882c
ST398:
SAPIG1011
T0131:
SAT0131_01051
TCH60:
HMPREF0772_12218
TW20:
SATW20_10130
USA300_TCH1516:
USA300HOU_0974
VC40:
SAVC_04245
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVTSIAVAITSLA
N315 ------MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVTSIAVAITSLA
NCTC8325 MERFLYMQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVTSIAVAITSLA
Newman ------MQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVTSIAVAITSLA
USA300_FPR3757 MERFLYMQDSSLNNYANHKNFILMLIILFLMEFARGMYILSYINFLPTVTSIAVAITSLA
******************************************************
COL FSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPASPFVIIFSAMMLG
N315 FSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPASPFVIIFSAMMLG
NCTC8325 FSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPASPFVIIFSAMMLG
Newman FSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPASPFVIIFSAMMLG
USA300_FPR3757 FSIHFIADASTNFVIGFLLKKFGTKIVLTTGFILAFTSLFLVIWFPASPFVIIFSAMMLG
************************************************************
COL IAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIKVHPTRFAFMMSLVV
N315 IAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIKVHPTRFAFMMSLVV
NCTC8325 IAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIKVHPTRFAFMMSLVV
Newman IAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIKVHPTRFAFMMSLVV
USA300_FPR3757 IAVSPIWVIMLSSVEEDKRGKQMGYVYFSWLLGLLVGMVFMNLLIKVHPTRFAFMMSLVV
************************************************************
COL LIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGILLQGAAIAALVPILPTY
N315 LIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGILLQGAAIAALVPILPTY
NCTC8325 LIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGILLQGAAIAALVPILPTY
Newman LIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGILLQGAAIAALVPILPTY
USA300_FPR3757 LIAWILYYFVDVKLTNYNTRPVKAQLRQIVDVTKRHLLLFPGILLQGAAIAALVPILPTY
************************************************************
COL ATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFMYGVILSGFILYMILIFTL
N315 ATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFMYGVILSGFILYMILIFTL
NCTC8325 ATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFMYGVILSGFILYMILIFTL
Newman ATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFMYGVILSGFILYMILIFTL
USA300_FPR3757 ATKVINVSTIEYTVAIIIGGIGCAVSMLFLSKLIDNRSRNFMYGVILSGFILYMILIFTL
************************************************************
COL SMIVNIHILWIIALAIGLMYGILLPAWNTFMARFIKSDEQEETWGVFNSIQGFGSMIGPL
N315 SMIVNIHIVWIIALAIGLMYGILLPAWNTFMARFIKSDEQEETWGVFNSIQGFGSMIGPL
NCTC8325 SMIVNIHILWIIALAIGLMYGILLPAWNTFMARFIKSDEQEETWGVFNSIQGFGSMIGPL
Newman SMIVNIHILWIIALAIGLMYGILLPAWNTFMARFIKSDEQEETWGVFNSIQGFGSMIGPL
USA300_FPR3757 SMIVNIHILWIIALAIGLMYGILLPAWNTFMARFIKSDEQEETWGVFNSIQGFGSMIGPL
********:***************************************************
COL FGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIVNREKAK
N315 FGGLITQFTNDLNNTFYFSALIFLVLAVFYGSYFIANREKAK
NCTC8325 FGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIVNREKAK
Newman FGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIVNREKAK
USA300_FPR3757 FGGLITQFTNNLNNTFYFSALIFLVLAVFYGSYFIVNREKAK
**********:************************.******