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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003950000
- symbol?: ribU
- synonym:
- description?: ECF transporter S component
- ECF transporter S component
- ECF-type riboflavin transporter, putative
- membrane protein
- Membrane protein-like protein
- riboflavin ECF transporter substrate-specific protein RibU
- riboflavin transporter
- riboflavin transporter RibU
- Substrate-specific component RibU of riboflavin ECF transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4265863..4266408
- synteny block?: BlockID0029960
- occurrence?: in 100% of 33 strains
ribU: energy-coupling factor transporter riboflavin-binding component RibU[1]
A crystal structure is available at: 3P5N
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1441 (ribU)
08BA02176:
C248_1525
11819-97:
MS7_1438 (ribU)
6850:
RSAU_001355
71193:
ST398NM01_1484
ECT-R 2:
ECTR2_1336
ED133:
SAOV_1491
ED98:
SAAV_1472
HO 5096 0412:
SAEMRSA15_13440
JH1:
SaurJH1_1572
JH9:
SaurJH9_1541
JKD6008:
SAA6008_01453
JKD6159:
SAA6159_01348
LGA251:
SARLGA251_13970
M013:
M013TW_1432
MRSA252:
SAR1493
MSHR1132:
SAMSHR1132_13230
MSSA476:
SAS1425
Mu3:
SAHV_1473
Mu50:
SAV1485
MW2:
MW1373
RF122:
SAB1347c
ST398:
SAPIG1484
T0131:
SAT0131_01574
TCH60:
HMPREF0772_11721
TW20:
SATW20_14820
USA300_TCH1516:
USA300HOU_1423
VC40:
SAVC_06670
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVAL
N315 MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVAL
NCTC8325 MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVAL
Newman MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVAL
USA300_FPR3757 MQQNKRLITISMLSAIAFVLTFIKFPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIVVAL
************************************************************
COL VKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLS
N315 VKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLS
NCTC8325 VKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLS
Newman VKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLS
USA300_FPR3757 VKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLS
************************************************************
COL ILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR
N315 ILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR
NCTC8325 ILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR
Newman ILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR
USA300_FPR3757 ILNYFVLLPLYGMIFNLADIANNLKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR
************************************************************
COL I
N315 I
NCTC8325 I
Newman I
USA300_FPR3757 I
*
- ↑ Peng Zhang, Jiawei Wang, Yigong Shi
Structure and mechanism of the S component of a bacterial ECF transporter.
Nature: 2010, 468(7324);717-20
[PubMed:20972419] [WorldCat.org] [DOI] (I p)