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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005588000
- symbol?: lacD
- synonym:
- description?: tagatose 1,6-diphosphate aldolase
- tagatose 1,6-diphosphate aldolase
- tagatose-bisphosphate aldolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5729286..5730266
- synteny block?: BlockID0043480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2130 (lacD)
08BA02176:
C248_2230 (lacD)
11819-97:
MS7_2215 (lacD)
6850:
RSAU_002036 (lacD)
71193:
ST398NM01_2252
ECT-R 2:
ECTR2_2053 (lacD)
ED133:
SAOV_2239c
ED98:
SAAV_2253 (lacD)
HO 5096 0412:
SAEMRSA15_20970 (lacD)
JH1:
SaurJH1_2262
JH9:
SaurJH9_2223
JKD6008:
SAA6008_02233 (lacD)
JKD6159:
SAA6159_02103 (lacD)
LGA251:
SARLGA251_19870 (lacD)
M013:
M013TW_2158
MRSA252:
SAR2283 (lacD)
MSHR1132:
SAMSHR1132_20240
MSSA476:
SAS2093
Mu3:
SAHV_2176 (lacD)
Mu50:
SAV2192 (lacD)
MW2:
MW2118 (lacD)
RF122:
SAB2073c (lacD)
ST398:
SAPIG2252 (lacD)
T0131:
SAT0131_02366
TCH60:
HMPREF0772_10999 (lacD)
TW20:
SATW20_23300 (lacD)
USA300_TCH1516:
USA300HOU_2185 (lacD)
VC40:
SAVC_09850 (lacD)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
N315 MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
NCTC8325 MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
Newman MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
USA300_FPR3757 MSKSNQKIASIEQLSNNEGIISALAFDQRGALKRMMAKHQTEEPTVAQIEQLKVLVAEEL
************************************************************
COL TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
N315 TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
NCTC8325 TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
Newman TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
USA300_FPR3757 TQYASSILLDPEYGLPASDARNKDCGLLLAYEKTGYDVNAKGRLPDCLVEWSAKRLKEQG
************************************************************
COL ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
N315 ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
NCTC8325 ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
Newman ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
USA300_FPR3757 ANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFA
************************************************************
COL KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
N315 KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
NCTC8325 KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
Newman KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
USA300_FPR3757 KVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAA
************************************************************
COL THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
N315 THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
NCTC8325 THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
Newman THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
USA300_FPR3757 THLPYIYLSAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWL
************************************************************
COL RTTGFKNIDDLNKVLKDTATSWKQRK
N315 RTTGFKNIDDLNKVLKDTATSWKQRK
NCTC8325 RTTGFKNIDDLNKVLKDTATSWKQRK
Newman RTTGFKNIDDLNKVLKDTATSWKQRK
USA300_FPR3757 RTTGFKNIDDLNKVLKDTATSWKQRK
**************************