From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN003065000
  • symbol?: glpQ
  • description?: glycerophosphoryl diester phosphodiesterase

      descriptions from strain specific annotations:

    • glycerophosphoryl diester phosphodiesterase
    • glycerophosphodiester phosphodiesterase
    • glycerophosphoryl diester phosphodiesterase GlpQ, putative
    • putative glycerophosphoryl diester phosphodiesterase
    • glycerophosphoryl diester phosphodiesterase (Glycerophosphodiester phosphodiesterase)
    • glycerophosphoryl diester phosphodiesterase,periplasmic
  • strand?: -
  • coordinates?: 3452557..3453186
  • synteny block?: BlockID0021730
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA0820 (glpQ)
    NCTC8325:
    Newman:
    NWMN_0830 (glpQ)
    USA300_FPR3757:
    04-02981:
    SA2981_0914 (glpQ)
    08BA02176:
    C248_0960 (glpQ)
    11819-97:
    MS7_0914 (glpQ)
    71193:
    ST398NM01_0942
    ECT-R 2:
    ECTR2_815
    ED133:
    SAOV_0905c
    ED98:
    SAAV_0920
    HO 5096 0412:
    SAEMRSA15_07890 (glpQ)
    JH1:
    SaurJH1_0978
    JH9:
    SaurJH9_0959
    JKD6008:
    SAA6008_00912 (glpQ)
    JKD6159:
    SAA6159_00818 (glpQ)
    LGA251:
    SARLGA251_08770 (glpQ)
    M013:
    M013TW_0878
    MRSA252:
    SAR0921 (glpQ)
    MSHR1132:
    SAMSHR1132_08110
    MSSA476:
    SAS0829
    Mu3:
    SAHV_0954 (glpQ)
    Mu50:
    SAV0959 (glpQ)
    MW2:
    MW0841 (glpQ)
    RF122:
    SAB0827c (glpQ)
    ST398:
    SAPIG0942
    T0131:
    SAT0131_00991
    TCH60:
    HMPREF0772_12287 (glpQ4)
    TW20:
    SATW20_09590 (glpQ)
    USA300_TCH1516:
    USA300HOU_0918 (glpQ2)
    VC40:
    SAVC_03970

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
    N315            MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
    NCTC8325        MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
    Newman          MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
    USA300_FPR3757  MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
                    ************************************************************

    COL             GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
    N315            GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
    NCTC8325        GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
    Newman          GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
    USA300_FPR3757  GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
                    ************************************************************

    COL             LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
    N315            LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
    NCTC8325        LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
    Newman          LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
    USA300_FPR3757  LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
                    ************************************************************

    COL             EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
    N315            EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
    NCTC8325        EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
    Newman          EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
    USA300_FPR3757  EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
                    ************************************************************

    COL             RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
    N315            RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
    NCTC8325        RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
    Newman          RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
    USA300_FPR3757  RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
                    ************************************************************

    COL             ADKYKEVIK
    N315            ADKYKEVIK
    NCTC8325        ADKYKEVIK
    Newman          ADKYKEVIK
    USA300_FPR3757  ADKYKEVIK
                    *********