PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003930000
• symbol^?: hepT
• synonym:
• description^?: heptaprenyl diphosphate synthase subunit II

  descriptions from strain specific annotations:

  • heptaprenyl diphosphate synthase subunit II
  • heptaprenyl diphosphate syntase component II
  • polyprenyl synthetase
  • heptaprenyl diphosphate synthase
  • heptaprenyl diphosphate synthase component II
  • heptaprenyl diphosphate synthase component II, putative
  • Farnesyl pyrophosphate synthetase
  • heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit 2) (Spore germination protein C3)
  • heptaprenyl diphosphate synthase component II (hepppsynthase subunit 2) (spore germination protein c3)
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane protein
  • putative heptaprenyl diphosphate synthase component II
  • putative heptaprenyl diphosphate synthase subunit II
  • trans-hexaprenyltranstransferase subunit II
• strand^?: -
• coordinates^?: 4249771..4250616
• synteny block^?: BlockID0029760
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1510
N315:
SA1302 (gerCC)
NCTC8325:
SAOUHSC_01486
Newman:
NWMN_1379 (hepT)
USA300_FPR3757:
SAUSA300_1359
04-02981:
SA2981_1426 (gerCC)
08BA02176:
C248_1509
11819-97:
MS7_1424 (hepT)
6850:
RSAU_001340 (gerCC)
71193:
ST398NM01_1468
ECT-R 2:
ECTR2_1322
ED133:
SAOV_1476
ED98:
SAAV_1457
HO 5096 0412:
SAEMRSA15_13300
JH1:
SaurJH1_1557
JH9:
SaurJH9_1527
JKD6008:
SAA6008_01438 (gerCC)
JKD6159:
SAA6159_01334 (gerCC)
LGA251:
SARLGA251_13820
M013:
M013TW_1417
MRSA252:
SAR1479
MSHR1132:
SAMSHR1132_13090
MSSA476:
SAS1411
Mu3:
SAHV_1458 (gerCC)
Mu50:
SAV1470 (gerCC)
MW2:
MW1359 (gerCC)
RF122:
SAB1332c
ST398:
SAPIG1468
T0131:
SAT0131_01558 (set20)
TCH60:
HMPREF0772_11736 (hepT)
TW20:
SATW20_14670
USA300_TCH1516:
USA300HOU_1407 (gerC)
VC40:
SAVC_06600

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKD
  N315            ---MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKD
  NCTC8325        --------MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKD
  Newman          MINVAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKD
  USA300_FPR3757  --------MNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKD
                          ****************************************************
  
  COL             EQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALG
  N315            EQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALG
  NCTC8325        EQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALG
  Newman          EQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALG
  USA300_FPR3757  EQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALG
                  ************************************************************
  
  COL             LEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQIST
  N315            LEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQIST
  NCTC8325        LEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQIST
  Newman          LEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQIST
  USA300_FPR3757  LEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQIST
                  ************************************************************
  
  COL             EVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLP
  N315            EVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLP
  NCTC8325        EVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLP
  Newman          EVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLP
  USA300_FPR3757  EVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLP
                  ************************************************************
  
  COL             ILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISE
  N315            ILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISE
  NCTC8325        ILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISE
  Newman          ILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISE
  USA300_FPR3757  ILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISE
                  ************************************************************
  
  COL             LPDGHPKSLLLSLTKKMGSRNT
  N315            LPDGHPKSLLLSLTKKMGSRNT
  NCTC8325        LPDGHPKSLLLSLTKKMGSRNT
  Newman          LPDGHPKSLLLSLTKKMGSRNT
  USA300_FPR3757  LPDGHPKSLLLSLTKKMGSRNT
                  **********************