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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0282 [new locus tag: SA_RS01645 ]
- pan locus tag?: SAUPAN001199000
- symbol: SA0282
- pan gene symbol?: esaG1
- synonym: esaG
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0282 [new locus tag: SA_RS01645 ]
- symbol: SA0282
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 340566..341057
- length: 492
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123061 NCBI
- RefSeq: NP_373528 NCBI
- BioCyc: see SA_RS01645
- MicrobesOnline: 102554 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGACATTTGAAGAGAAGCTTAGCAAAATATACAATGAAATTGCGAATGAGATTAGCAAT
ATGATACCGGTAGAGTGGGAAAAAGTATATACAATGGCTTATATAGATGATGGAGGAGGG
GAGGTATTCTTTAATTATACTAAGCCAGGTAGTGATGACTTGAATTATTACACCGATATA
CCTAAGGAGTATAACATTTCTGTGCAAGTATTTGATGATTTATGGATGGATTTATATGAT
TTGTTTGAGGAGTTAAGAGATTTATTTAAAGAAGAAGATTTAGAACCATGGACATCATGT
GAATTTGACTTTACAAGAGAGGGTAAATTGAAAGTATCATTTGATTATATAGATTGGATA
AATACAGAGTTTGATCAATTGGGCCGTGAAAATTATTATATGTACAAAAAATTTGGGGTT
ATACCAGAAATGGAATATGAAATGGAGGAGGTTAAACAAATCGAGCAATATATTAAAGAG
CAAGAAGAATAG60
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492
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0282 [new locus tag: SA_RS01645 ]
- symbol: SA0282
- description: hypothetical protein
- length: 163
- theoretical pI: 3.80294
- theoretical MW: 19871
- GRAVY: -0.710429
⊟Function[edit | edit source]
- TIGRFAM: conserved hypothetical protein (TIGR01741; HMM-score: 262.2)
- TheSEED :
- Repetitive hypothetical protein near ESAT cluster, SA0282 homolog
- PFAM: no clan defined DUF600; Protein of unknown function, DUF600 (PF04634; HMM-score: 175.9)and 3 moreDUF1031; Protein of unknown function (DUF1031) (PF06275; HMM-score: 13.6)Chalcone-like (CL0560) Chalcone; Chalcone-flavanone isomerase (PF02431; HMM-score: 11.5)no clan defined RTX; RTX N-terminal domain (PF02382; HMM-score: 10)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.008518
- TAT(Tat/SPI): 0.000318
- LIPO(Sec/SPII): 0.000607
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTFEEKLSKIYNEIANEISNMIPVEWEKVYTMAYIDDGGGEVFFNYTKPGSDDLNYYTDIPKEYNISVQVFDDLWMDLYDLFEELRDLFKEEDLEPWTSCEFDFTREGKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVIPEMEYEMEEVKQIEQYIKEQEE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Zhenping Cao, M Guillermina Casabona, Holger Kneuper, James D Chalmers, Tracy Palmer
The type VII secretion system of Staphylococcus aureus secretes a nuclease toxin that targets competitor bacteria.
Nat Microbiol: 2016, 2;16183
[PubMed:27723728] [WorldCat.org] [DOI] (I e)