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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005782000
- symbol?: —
- synonym:
- description?: N-acetylmuramoyl-L-alanine amidase
- N-acetylmuramoyl-L-alanine amidase
- autolysin E, putative
- putative N-acetylmuramoyl-L-alanine amidase
- autolysin E
- bifunctional autolysin
- mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein
- mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
- mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein
- peptidoglycan endo-beta-N-acetylglucosaminidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5869017..5869655
- synteny block?: BlockID0045270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2245
08BA02176:
C248_2348
11819-97:
MS7_2324
6850:
RSAU_002144
71193:
ST398NM01_2357
ECT-R 2:
ECTR2_2166
ED133:
SAOV_2346c
ED98:
SAAV_2368
HO 5096 0412:
SAEMRSA15_22040
JH1:
SaurJH1_2373
JH9:
SaurJH9_2330
JKD6008:
SAA6008_02342 (lytA)
JKD6159:
SAA6159_02210 (lytA)
LGA251:
SARLGA251_20890
M013:
M013TW_2263
MRSA252:
SAR2391
MSHR1132:
SAMSHR1132_21310
MSSA476:
SAS2198
Mu3:
SAHV_2291
Mu50:
SAV2307
MW2:
MW2226
RF122:
SAB2183c
ST398:
SAPIG2357
T0131:
SAT0131_02485 (mutS2)
TCH60:
HMPREF0772_10889 (amiD3)
TW20:
SATW20_24370
USA300_TCH1516:
USA300HOU_2288 (lytA)
VC40:
SAVC_10390
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEED
N315 MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEED
NCTC8325 ----------------------------------------------MQQGKGIVQTKEED
Newman MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEED
USA300_FPR3757 MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEED
**************
COL GKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEA
N315 GKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEA
NCTC8325 GKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEA
Newman GKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEA
USA300_FPR3757 GKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEA
************************************************************
COL QEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEK
N315 QEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEK
NCTC8325 QEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEK
Newman QEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEK
USA300_FPR3757 QEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGIGAFDSSAVRSGKSYAEK
************************************************************
COL EQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDK
N315 EQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDK
NCTC8325 EQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDK
Newman EQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDK
USA300_FPR3757 EQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDK
************************************************************
COL SYKQFGIKKDDIRQTYYK
N315 SYKQFGIKKDDIRQTYYK
NCTC8325 SYKQFGIKKDDIRQTYYK
Newman SYKQFGIKKDDIRQTYYK
USA300_FPR3757 SYKQFGIKKDDIRQTYYK
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