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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006370000
- symbol?: —
- synonym:
- description?: conserved low-complexity protein
- conserved low-complexity protein
- exported protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6405623..6406126
- synteny block?: BlockID0050790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2578
08BA02176:
C248_2707
11819-97:
MS7_2644
6850:
RSAU_002482
71193:
ST398NM01_2689
ECT-R 2:
ECTR2_2493
ED133:
SAOV_2688
ED98:
SAAV_2709
HO 5096 0412:
SAEMRSA15_25440
JH1:
SaurJH1_2719
JH9:
SaurJH9_2663
JKD6008:
SAA6008_02698
JKD6159:
SAA6159_02535
LGA251:
SARLGA251_24110
M013:
M013TW_2620
MRSA252:
SAR2718
MSHR1132:
SAMSHR1132_24630
MSSA476:
SAS2525
Mu3:
SAHV_2623
Mu50:
SAV2639
MW2:
MW2560
RF122:
SAB2514
ST398:
SAPIG2689
T0131:
SAT0131_02905 (pcp)
TCH60:
HMPREF0772_10548
TW20:
SATW20_27770
USA300_TCH1516:
USA300HOU_2639
VC40:
SAVC_12075
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHKKTETEENDQQDDSADK
N315 MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHKKTETEENDQQDDSADK
NCTC8325 MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHKKTETEENDQQDDSADK
Newman MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHKKTETEENDQQDDSADK
USA300_FPR3757 MKKLLITIVIIVLIGALGFAIYAAINHSTSSSNNQEQENKSTHKKTETEENDQQDDSADK
************************************************************
COL TDKNQNNGNNVTNDNQPSSPSNVPNNHSTVPSNTQPAQPKDSNSNKNNTHGGGSQSSTNN
N315 TDKNQNNGNNDTNDNQPSSPSNVPNNHSTVPSNTQPAQPNDSNSNKNNTHGGGSQSSTNN
NCTC8325 TDKNQNNGNNVTNDNQPSSPSNVPNNHSTVPSNTQPAQPKDSNSNKNNTHGGGSQSSTNN
Newman TDKNQNNGNNVTNDNQPSSPSNVPNNHSTVPSNTQPAQPKDSNSNKNNTHGGGSQSSTNN
USA300_FPR3757 TDKNQNNGNNVTNDNQPSSPSNVPNNHSTVPSNTQPAQPKDSNSNKNNTHGGGSQSSTNN
********** ****************************:********************
COL QNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN
N315 QNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN
NCTC8325 QNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN
Newman QNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN
USA300_FPR3757 QNNQQQNTPPANKSNNTNTPSKQTPQAQSPKN
********************************