⊟Summary

• pan ID^?: SAUPAN001857000
• symbol^?: —
• description^?: macro domain protein

  descriptions from strain specific annotations:

  • macro domain protein
  • protein in Tap1-dppD intergenic region
  • ATPase associated with chromosome architecture/replication
  • appr-1-p processing enzyme family domain protein
• strand^?: +
• coordinates^?: 2355102..2355902
• synteny block^?: BlockID0012320
• occurrence^?: in 100% of 32 strains

⊟Orthologs

COL:
SACOL0396
N315:
SA0314
NCTC8325:
SAOUHSC_00306
Newman:
NWMN_0318
USA300_FPR3757:
SAUSA300_0326
04-02981:
SA2981_0324
08BA02176:
C248_0378
11819-97:
MS7_0315
71193:
ST398NM01_0405
ECT-R 2:
ECTR2_285
ED133:
SAOV_0351
ED98:
SAAV_0293
HO 5096 0412:
SAEMRSA15_02810
JH1:
SaurJH1_0384
JH9:
SaurJH9_0374
JKD6008:
SAA6008_00302
JKD6159:
SAA6159_00301
LGA251:
SARLGA251_02870
M013:
M013TW_0306
MRSA252:
SAR0322
MSHR1132:
SAMSHR1132_02990
MSSA476:
SAS0302
Mu3:
SAHV_0322
Mu50:
SAV0325
MW2:
MW0302
RF122:
SAB0275
ST398:
SAPIG0405
T0131:
SAT0131_00330 (folC)
TCH60:
HMPREF0772_10170
TW20:
SATW20_03930
USA300_TCH1516:
USA300HOU_0346
VC40:
SAVC_01375

⊟Genome Viewer

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.205)
  
  
  COL             METLKSNKARLEYLINDMHRERNDNDVLVMPSSFEDLWELYRGLANVRPALPVSDEYLAV
  N315            METLKSNKARLEYLINDMRRERNDNDVLVMPSSFEDLWELYRGLANVRPALPVSDEYLAV
  NCTC8325        METLKSNKARLEYLINDMHRERNDNDVLVMPSSFEDLWELYRGLANVRPALPVSDEYLAV
  Newman          METLKSNKARLEYLINDMHRERNDNDVLVMPSSFEDLWELYRGLANVRPALPVSDEYLAV
  USA300_FPR3757  METLKSNKARLEYLINDMHRERNDNDVLVMPSSFEDLWELYRGLANVRPALPVSDEYLAV
                  ******************:*****************************************
  
  COL             QDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAIVNAANSRFLGCMQANHDC
  N315            QDAMLSDLNHQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAIVNAANSRFLGCMQANHDC
  NCTC8325        QDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAIVNAANSRFLGCMQANHDC
  Newman          QDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAIVNAANSRFLGCMQANHDC
  USA300_FPR3757  QDAMLSDLNRQHVTDLKDLKPIKGDNIFVWQGDITTLKIDAIVNAANSRFLGCMQANHDC
                  *********:**************************************************
  
  COL             IDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYNLSAKYIIHTVGPQIRRLPVS
  N315            IDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKKTRGYNLPAKYIIHTVGPQIRRLPVS
  NCTC8325        IDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYNLPAKYIIHTVGPQIRRLPVS
  Newman          IDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYNLSAKYIIHTVGPQIRRLPVS
  USA300_FPR3757  IDNIIHTKAGVQVRLDCAEIIRQQGRNEGVGKAKITRGYNLSAKYIIHTVGPQIRRLPVS
                  ********************************** ******.******************
  
  COL             KMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKETNS
  N315            KMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKETNS
  NCTC8325        KMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKETNS
  Newman          KMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKETNS
  USA300_FPR3757  KMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKETNS
                  ************************************************************
  
  COL             TLKVVFNVFTDKDLQLYKEAFNRDAE
  N315            TLKVVFNVFTDKDLQLYKEALNRDAE
  NCTC8325        TLKVVFNVFTDKDLQLYKEAFNRDAE
  Newman          TLKVVFNVFTDKDLQLYKEAFNRDAE
  USA300_FPR3757  TLKVVFNVFTDKDLQLYKEAFNRDAE
                  ********************:*****