Jump to navigation
Jump to search
NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1678 [new locus tag: SA_RS09630 ]
- pan locus tag?: SAUPAN004840000
- symbol: SA1678
- pan gene symbol?: perR
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1678 [new locus tag: SA_RS09630 ]
- symbol: SA1678
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1924624..1925070
- length: 447
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124561 NCBI
- RefSeq: NP_374968 NCBI
- BioCyc: see SA_RS09630
- MicrobesOnline: 103994 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGAGTGTTGAAATAGAATCAATTGAACATGAACTAGAAGAATCAATTGCATCATTGCGA
CAAGCAGGCATAAGAATTACACCTCAAAGACAAGCAATATTACGTTATTTAATTTCTTCA
CATACTCATCCAACAGCTGATGAAATTTATCAAGCACTTTCACCTGATTTTCCAAATATA
AGTGTTGCGACAATATATAATAACTTAAGAGTGTTTAAAGATATTGGAATTGTAAAAGAA
TTAACATATGGAGACTCATCAAGTCGATTCGACTTTAATACACATAATCATTATCATATT
ATATGTGAACAATGTGGTAAGATTGTTGATTTTCAATATCCACAGTTAAATGAAATTGAA
AGATTAGCTCAGCATATGACTGACTTTGACGTAACACATCATCGAATGGAAATTTATGGA
GTTTGTAAAGAATGCCAAGATAAATAA60
120
180
240
300
360
420
447
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1678 [new locus tag: SA_RS09630 ]
- symbol: SA1678
- description: hypothetical protein
- length: 148
- theoretical pI: 5.47242
- theoretical MW: 17197.2
- GRAVY: -0.419595
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Peroxide stress regulator PerR, FUR family
- ⊞PFAM: HTH (CL0123) FUR; Ferric uptake regulator family (PF01475; HMM-score: 137.8)and 11 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors: Hydrogen peroxide; Iron ion (Fe2+) and Manganese ion (Mn2+) act as corepressor
- ⊞genes regulated by PerR*, TF important in Oxidative stress responseRegPrecise
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSVEIESIEHELEESIASLRQAGIRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SA1678 < SA1679 < SA1680
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available